PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072882.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 310aa    MW: 35087.1 Da    PI: 10.0781
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP88.71.3e-2745131288
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg 88 
                      g+kdrhsk++T +g+RdRR+Rls+++a +++dLq++LG+ ++sk ++WLl + k+ i++l+ ++ ++a ++  +++    +   ++ +
  XP_011072882.1  45 SGGKDRHSKVYTLRGLRDRRIRLSVPTALQLYDLQEKLGLNQPSKVVDWLLDATKHDIDKLPPLPVIPAVNFaqSHQPTALTF--HHDQ 131
                     689*************************************************************8888833312111111111..1111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.4E-2346118IPR005333Transcription factor, TCP
PROSITE profilePS5136927.40447105IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MRDFRSKNEG ENEYNKFPKI NTTSTSRPQW SRFRNPRIFR VSSASGGKDR HSKVYTLRGL  60
RDRRIRLSVP TALQLYDLQE KLGLNQPSKV VDWLLDATKH DIDKLPPLPV IPAVNFAQSH  120
QPTALTFHHD QSAAKELVMK MNVERGKNKW IAQENEEGFG GFMAQLSAHN FFPLSNHSTL  180
PTMPYNSSDL NWDSAQNLSL SQFGGGFSFS AQTQENSHSE SNLSSVLPSS SQLFFPSVFP  240
PFSSYIGTPS VENDCHFRHL HHLQNVQQNS PMPTSTLRFI TSPMKSFSLN ADDKSVSSQE  300
NGTRKDRRNS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072882.10.0PREDICTED: transcription factor TCP17-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8212499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02150.14e-41plastid transcription factor 1